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CND05300 hypothetical protein [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 3257120, updated on 17-May-2024

Summary

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Gene symbol
CND05300
Gene description
hypothetical protein
Primary source
FungiDB:CND05300
Locus tag
CND05300
See related
VEuPathDB:CND05300
Gene type
protein coding
RNA name
conserved hypothetical protein
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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See CND05300 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Sequence:
Chromosome: 4; NC_006686.1 (1444799..1445957, complement)

Chromosome 4 - NC_006686.1Genomic Context describing neighboring genes Neighboring gene cytoplasm protein, putative Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene expressed protein Neighboring gene hypothetical protein Neighboring gene expressed protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006686.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in U4 snRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear mRNA surveillance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in poly(A)-dependent snoRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytoplasmic exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006686.1 Reference assembly

    Range
    1444799..1445957 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_570646.2 → XP_570646.1  conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]

    See identical proteins and their annotated locations for XP_570646.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A225Z2V4, Q55UK4, Q5KHU0
    Conserved Domains (2) summary
    cd11370
    Location:13 → 237
    RNase_PH_RRP41; RRP41 subunit of eukaryotic exosome
    PRK03983
    Location:1 → 222
    PRK03983; exosome complex exonuclease Rrp41; Provisional
Nucleotide Protein
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