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CND02340 allantoicase, putative [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 3256911, updated on 17-May-2024

Summary

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Gene symbol
CND02340
Gene description
allantoicase, putative
Locus tag
CND02340
See related
FungiDB:CND02340; VEuPathDB:CND02340
Gene type
protein coding
RNA name
allantoicase, putative
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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Location:
chromosome: 4
Exon count:
9
Sequence:
Chromosome: 4; NC_006686.1 (624853..628007, complement)

Chromosome 4 - NC_006686.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene vacuolar (H+)-ATPase subunit, putative Neighboring gene transferase, putative Neighboring gene expressed protein Neighboring gene co-chaperone, putative Neighboring gene eukaryotic translation initiation factor 3 subunit 11, putative Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006686.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables allantoicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ureidoglycolate hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ureidoglycolate lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in allantoin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
allantoicase, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006686.1 Reference assembly

    Range
    624853..628007 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_570443.2 → XP_570443.1  allantoicase, putative [Cryptococcus neoformans var. neoformans JEC21]

    See identical proteins and their annotated locations for XP_570443.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A225YXX1, Q55TQ1, Q5KIN4
    Conserved Domains (4) summary
    TIGR02961
    Location:19 → 361
    allantoicase; allantoicase
    pfam03561
    Location:29 → 181
    Allantoicase; Allantoicase repeat
    pfam04115
    Location:383 → 571
    Ureidogly_hydro; Ureidoglycolate hydrolase
    cl01250
    Location:613 → 797
    Ureidogly_hydro; Ureidoglycolate hydrolase
Nucleotide Protein
Heading Accession and Version

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