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CNM01000 ER to Golgi transport-related protein, putative [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 3255235, updated on 17-May-2024

Summary

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Gene symbol
CNM01000
Gene description
ER to Golgi transport-related protein, putative
Primary source
FungiDB:CNM01000
Locus tag
CNM01000
See related
VEuPathDB:CNM01000
Gene type
protein coding
RNA name
ER to Golgi transport-related protein, putative
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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See CNM01000 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
8
Sequence:
Chromosome: 13; NC_006682.1 (299720..303254, complement)

Chromosome 13 - NC_006682.1Genomic Context describing neighboring genes Neighboring gene expressed protein Neighboring gene hypothetical protein Neighboring gene ribosomal protein L13, putative Neighboring gene tricarboxylate carrier, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006682.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in COPII-coated vesicle cargo loading IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPII vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum exit site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ER to Golgi transport-related protein, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006682.1 Reference assembly

    Range
    299720..303254 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_568412.2 → XP_568412.1  ER to Golgi transport-related protein, putative [Cryptococcus neoformans var. neoformans JEC21]

    See identical proteins and their annotated locations for XP_568412.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A225XGA2, Q55ID3, Q5K7X0
    Conserved Domains (5) summary
    COG5028
    Location:32 → 988
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
    pfam04810
    Location:253 → 290
    zf-Sec23_Sec24; Sec23/Sec24 zinc finger
    pfam04815
    Location:736 → 830
    Sec23_helical; Sec23/Sec24 helical domain
    pfam08033
    Location:637 → 721
    Sec23_BS; Sec23/Sec24 beta-sandwich domain
    cl00057
    Location:393 → 636
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Nucleotide Protein
Heading Accession and Version

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