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CNK00870 hypothetical protein [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 3254648, updated on 17-May-2024

Summary

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Gene symbol
CNK00870
Gene description
hypothetical protein
Locus tag
CNK00870
See related
FungiDB:CNK00870; VEuPathDB:CNK00870
Gene type
protein coding
RNA name
conserved hypothetical protein
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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Location:
chromosome: 11
Exon count:
4
Sequence:
Chromosome: 11; NC_006680.1 (275262..276277, complement)

Chromosome 11 - NC_006680.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene early growth response protein 1 (egr-1), putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006680.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in organonitrogen compound catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006680.1 Reference assembly

    Range
    275262..276277 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_567650.2 → XP_567650.1  conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]

    See identical proteins and their annotated locations for XP_567650.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A225ZFH6, A0A854QHE4, Q55JS0, Q5K9T1
    Conserved Domains (1) summary
    cd00448
    Location:18 → 115
    YjgF_YER057c_UK114_family; YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no ...
Nucleotide Protein
Heading Accession and Version

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