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CNJ01590 hypothetical protein [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 3254316, updated on 17-May-2024

Summary

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Gene symbol
CNJ01590
Gene description
hypothetical protein
Locus tag
CNJ01590
See related
FungiDB:CNJ01590; VEuPathDB:CNJ01590
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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Location:
chromosome: 10
Exon count:
3
Sequence:
Chromosome: 10; NC_006679.1 (463464..466490)

Chromosome 10 - NC_006679.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene expressed protein Neighboring gene expressed protein Neighboring gene tRNA-Gly

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006679.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006679.1 Reference assembly

    Range
    463464..466490
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_567337.2 → XP_567337.1  hypothetical protein CNJ01590 [Cryptococcus neoformans var. neoformans JEC21]

    See identical proteins and their annotated locations for XP_567337.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0CQ94, P0CQ95, Q55KZ7, Q5KAI2
    UniProtKB/TrEMBL
    A0A225XTN2, A0A854QDD5
    Conserved Domains (5) summary
    PHA02682
    Location:30 → 197
    PHA02682; ORF080 virion core protein; Provisional
    smart00487
    Location:218 → 480
    DEXDc; DEAD-like helicases superfamily
    pfam00271
    Location:645 → 716
    Helicase_C; Helicase conserved C-terminal domain
    pfam13959
    Location:778 → 838
    DUF4217; Domain of unknown function (DUF4217)
    cl21455
    Location:202 → 477
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0CQ94.1

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