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Erum7870 ribonuclease D [ Ehrlichia ruminantium str. Welgevonden ]

Gene ID: 3233213, discontinued on 2-Mar-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:

Summary

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Gene symbol
Erum7870
Gene description
ribonuclease D
Locus tag
Erum7870
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ehrlichia ruminantium str. Welgevonden (strain: Welgevonden)
Lineage
Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Ehrlichia
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_005295.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: 1344412-1344918 Pfam match to entry PF01612 3_5_exonuclease, 3'-5' exonuclease, score 123.9, E-value 3.2e-34

General protein information

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Names
ribonuclease D
YP_180650.1
  • possible exonuclease | len: 205 aa | Similar to many uncharacterized proteins e.g. Q9A2G2 Ribonuclease D, (205 aa) from Caulobacter crescentus, fasta scores: E(): 1.9e-45, 55.340% identity in 206 aa overlap. However, only weakly similar to the first 170 residues of RND_ECOLI P09155 Ribonuclease D (375 aa) from Escherichia coli, fasta scores: E(): 0.00021, 32.468% identity in 154 aa overlap | Contains Pfam match to entry PF01612 3_5_exonuclease, 3'-5' exonuclease | Similar to Erum6950

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005295.2 Reference assembly

    Range
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_180650.1 ribonuclease D [Ehrlichia ruminantium str. Welgevonden]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5HA94.1

Gene LinkOut

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