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    CG31961 [ Drosophila melanogaster ]

    Gene ID: 319048, updated on 10-May-2012
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    Summary

    Official Symbol
    CG31961provided by Flybase
    Primary source
    FLYBASE:FBgn0051961
    Locus tag
    Dmel_CG31961
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:LD34582; CG3381; Dmel\CG31961
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    Genomic context

    Location :
    24D8-24D8
    Sequence :
    Chromosome: 2L; NT_033779.4 (4186245..4187789, complement)
    See CG31961 in Epigenomics, MapViewer

    Chromosome 2L - NT_033779.4Genomic Context describing neighboring genes Neighboring gene CG2955 gene product from transcript CG2955-RA Neighboring gene Odorant receptor 24a Neighboring gene CG2958 gene product from transcript CG2958-RA Neighboring gene CG3714 gene product from transcript CG3714-RC

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Genome-wide analysis of Notch signalling in Drosophila by transgenic RNAi. Mummery-Widmer JL, et al. Nature, 2009 Apr 23. PMID 19363474.
    2. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    3. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    4. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:77327 BioGRID:68045 CG14540    BioGRID  PubMed Two-hybrid 
    BioGRID:77327 BioGRID:68564 CG1638    BioGRID  PubMed Two-hybrid 
    BioGRID:77327 BioGRID:59785 CG8851    BioGRID  PubMed Two-hybrid 
    BioGRID:77327 BioGRID:68567 CycG    BioGRID  PubMed Two-hybrid 
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    General gene information

    Pathways from BioSystems

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    neurogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		  
    tubulin complex assembly ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
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    General protein information

    Preferred Names
    CG31961 gene product from transcript CG31961-RA
    Names
    CG31961
    CG31961-PA
    CG31961-PB
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.4

      Range
      4186245..4187789, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_164570.1 → NP_722959.1  CG31961, isoform A [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95TP0
      Related
      FBpp0077173, FBtr0077484
      Conserved Domains (2) summary
      smart00673
      Location:196 – 233
      Blast Score: 88
      CARP; Domain in CAPs (cyclase-associated proteins) and X-linked retinitis pigmentosa 2 gene product.
      pfam07986
      Location:188 – 306
      Blast Score: 329
      TBCC; Tubulin binding cofactor C

    2. NM_164571.1 → NP_722960.1  CG31961, isoform B [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95TP0
      Related
      FBpp0077174, FBtr0077485
      Conserved Domains (2) summary
      smart00673
      Location:196 – 233
      Blast Score: 88
      CARP; Domain in CAPs (cyclase-associated proteins) and X-linked retinitis pigmentosa 2 gene product.
      pfam07986
      Location:188 – 306
      Blast Score: 329
      TBCC; Tubulin binding cofactor C
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014134.5 AAN11168.1
    genomic AE014134.5 AAN11167.1
    mRNA AY058646.1 AAL13875.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q95TP0.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content