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YALI0_E01496g YALI0E01496p [ Yarrowia lipolytica CLIB122 ]

Gene ID: 2912040, updated on 17-May-2024

Summary

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Gene symbol
YALI0_E01496g
Gene description
YALI0E01496p
Primary source
FungiDB:YALI0_E01496g
Locus tag
YALI0_E01496g
See related
VEuPathDB:YALI0_E01496g
Gene type
protein coding
RNA name
YALI0E01496p
RefSeq status
PROVISIONAL
Organism
Yarrowia lipolytica CLIB122 (strain: CLIB122)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia
Old locus tag
YALI0E01496g
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Genomic context

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See YALI0_E01496g in Genome Data Viewer
Location:
chromosome: E
Exon count:
1
Sequence:
Chromosome: E; NC_006071.1 (170217..170993)

Chromosome E - NC_006071.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L37 Neighboring gene YALI0E01474p Neighboring gene YALI0E01518p Neighboring gene YALI0E01540p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006071.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA (pseudouridine) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA base methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
YALI0E01496p
XP_503418.1
  • highly similar to uniprot|Q06287 Saccharomyces cerevisiae YLR186w

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006071.1 Reference assembly

    Range
    170217..170993
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_503418.1 → XP_503418.1  YALI0E01496p [Yarrowia lipolytica CLIB122]

    See identical proteins and their annotated locations for XP_503418.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1D8NGQ3, Q6C7E4
    Conserved Domains (1) summary
    cd18088
    Location:49 → 252
    Nep1-like; 18S rRNA (pseudouridine(1248)-N1)-methyltransferase Nep1
Nucleotide Protein
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