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YALI0_C13112g YALI0C13112p [ Yarrowia lipolytica CLIB122 ]

Gene ID: 2909525, updated on 17-May-2024

Summary

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Gene symbol
YALI0_C13112g
Gene description
YALI0C13112p
Primary source
FungiDB:YALI0_C13112g
Locus tag
YALI0_C13112g
See related
VEuPathDB:YALI0_C13112g
Gene type
protein coding
RNA name
YALI0C13112p
RefSeq status
PROVISIONAL
Organism
Yarrowia lipolytica CLIB122 (strain: CLIB122)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia
Old locus tag
YALI0C13112g
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Genomic context

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See YALI0_C13112g in Genome Data Viewer
Location:
chromosome: C
Exon count:
1
Sequence:
Chromosome: C; NC_006069.1 (1807063..1808268)

Chromosome C - NC_006069.1Genomic Context describing neighboring genes Neighboring gene tRNA-Ile Neighboring gene YALI0C13090p Neighboring gene tRNA-Pro Neighboring gene YALI0C13178p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006069.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
YALI0C13112p
XP_501785.1
  • similar to uniprot|P39727 Saccharomyces cerevisiae YAL042w FUN9 component of copii vesicles involved in transport between the ER and golgi complex

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006069.1 Reference assembly

    Range
    1807063..1808268
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_501785.1 → XP_501785.1  YALI0C13112p [Yarrowia lipolytica CLIB122]

    See identical proteins and their annotated locations for XP_501785.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1D8NAY0, Q6CC27
    Conserved Domains (2) summary
    pfam07970
    Location:144 → 385
    COPIIcoated_ERV; Endoplasmic reticulum vesicle transporter
    pfam13850
    Location:7 → 95
    ERGIC_N; Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)
Nucleotide Protein
Heading Accession and Version

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