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YALI0_F30151g YALI0F30151p [ Yarrowia lipolytica CLIB122 ]

Gene ID: 2908597, updated on 17-May-2024

Summary

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Gene symbol
YALI0_F30151g
Gene description
YALI0F30151p
Primary source
FungiDB:YALI0_F30151g
Locus tag
YALI0_F30151g
See related
VEuPathDB:YALI0_F30151g
Gene type
protein coding
RNA name
YALI0F30151p
RefSeq status
PROVISIONAL
Organism
Yarrowia lipolytica CLIB122 (strain: CLIB122)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia
Old locus tag
YALI0F30151g
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Genomic context

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See YALI0_F30151g in Genome Data Viewer
Location:
chromosome: F
Exon count:
2
Sequence:
Chromosome: F; NC_006072.1 (3773228..3774170, complement)

Chromosome F - NC_006072.1Genomic Context describing neighboring genes Neighboring gene YALI0F30107p Neighboring gene YALI0F30129p Neighboring gene YALI0F30173p Neighboring gene YALI0F30195p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006072.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in COPII-coated vesicle budding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of TOR signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein exit from endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPII vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore outer ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
YALI0F30151p
XP_506037.1
  • similar to uniprot|Q04491 Saccharomyces cerevisiae YLR208w SEC13 protein transport protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006072.1 Reference assembly

    Range
    3773228..3774170 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_506037.1 → XP_506037.1  YALI0F30151p [Yarrowia lipolytica CLIB122]

    See identical proteins and their annotated locations for XP_506037.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q6BZX5
    UniProtKB/TrEMBL
    A0A1D8NQI2
    Conserved Domains (2) summary
    sd00039
    Location:57 → 96
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:8 → 283
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6BZX5.1

Gene LinkOut

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Molecular Biology Databases