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DEHA2E14762g DEHA2E14762p [ Debaryomyces hansenii CBS767 ]

Gene ID: 2902902, updated on 17-May-2024

Summary

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Gene symbol
DEHA2E14762g
Gene description
DEHA2E14762p
Primary source
FungiDB:DEHA2E14762g
Locus tag
DEHA2E14762g
See related
VEuPathDB:DEHA2E14762g
Gene type
protein coding
RNA name
DEHA2E14762p
RefSeq status
PROVISIONAL
Organism
Debaryomyces hansenii CBS767 (strain: CBS767, type-material: culture from type material of Debaryomyces hansenii)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces
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Genomic context

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See DEHA2E14762g in Genome Data Viewer
Location:
chromosome: E
Exon count:
1
Sequence:
Chromosome: E; NC_006047.2 (1183110..1184150, complement)

Chromosome E - NC_006047.2Genomic Context describing neighboring genes Neighboring gene DEHA2E14718p Neighboring gene DEHA2E14740p Neighboring gene DEHA2E14784p Neighboring gene DEHA2E14806p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006047.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II general transcription initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables TBP-class protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription preinitiation complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription preinitiation complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DEHA2E14762p
XP_459946.1
  • similar to uniprot|P29055 Saccharomyces cerevisiae YPR086w SUA7 Transcription factor TFIIB a general transcription factor required for transcription initiation and start site selection by RNA polymerase II

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006047.2 Reference assembly

    Range
    1183110..1184150 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_459946.1 → XP_459946.1  DEHA2E14762p [Debaryomyces hansenii CBS767]

    See identical proteins and their annotated locations for XP_459946.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q6BPC4
    Conserved Domains (3) summary
    COG1405
    Location:22 → 325
    SUA7; Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
    pfam00382
    Location:133 → 203
    TFIIB; Transcription factor TFIIB repeat
    pfam08271
    Location:23 → 65
    TF_Zn_Ribbon; TFIIB zinc-binding
Nucleotide Protein
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