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ANIA_06252 DNA-directed RNA polymerase II core subunit RPB3 [ Aspergillus nidulans FGSC A4 ]

Gene ID: 2870835, updated on 25-Apr-2024

Summary

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Gene symbol
ANIA_06252
Gene description
DNA-directed RNA polymerase II core subunit RPB3
Locus tag
ANIA_06252
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus nidulans FGSC A4 (strain: FGSC A4)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Nidulantes
Old locus tag
AN6252.4; AN6252.2
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Genomic context

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Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_066257.1 (749460..751027, complement)

Chromosome I - NC_066257.1Genomic Context describing neighboring genes Neighboring gene protein dicA Neighboring gene phenylalanine--tRNA ligase Neighboring gene polyphosphatase DDP1 Neighboring gene arginyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066257.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The 2008 update of the Aspergillus nidulans genome annotation: a community effort. Wortman JR, et al. Fungal Genet Biol, 2009 Mar. PMID 19146970, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by AspGD

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
  
contributes_to RNA polymerase II activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
involved_in transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of DNA-directed RNA polymerase complex IEA
Inferred from Electronic Annotation
more info
  
part_of RNA polymerase II, core complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of RNA polymerase II, core complex IEA
Inferred from Electronic Annotation
more info
  
part_of chromatin IEA
Inferred from Electronic Annotation
more info
  
part_of nuclear DNA-directed RNA polymerase complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
DNA-directed RNA polymerase II core subunit RPB3
XP_663856.1
  • transcript_id=CADANIAT00006740

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_066257.1 Reference assembly

    Range
    749460..751027 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_658764.2 → XP_663856.1  TPA: DNA-directed RNA polymerase II core subunit RPB3 [Aspergillus nidulans FGSC A4]

    See identical proteins and their annotated locations for XP_663856.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C8V1J2, Q5AZM8
    Conserved Domains (2) summary
    cd07031
    Location:12 → 272
    RNAP_II_RPB3; RPB3 subunit of Eukaryotic RNA polymerase II
    smart00662
    Location:24 → 264
    RPOLD; RNA polymerases D
Nucleotide Protein
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