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atoC1 response regulator [ Yersinia pestis biovar Microtus str. 91001 ]

Gene ID: 2765058, discontinued on 3-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:

Summary

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Gene symbol
atoC1
Gene description
response regulator
Locus tag
YP_0983
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Yersinia pestis biovar Microtus str. 91001 (strain: 91001, biovar: Microtus)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_005810.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: c1058323-1058207 ProfileScan match to entry PS50116 HTH_FIS_FAMILY, E-value 15.318

General protein information

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Names
response regulator
NP_992358.1
  • Best Blastp hit = gi|16611832|gb|AAL27375.1|AF426171_6 (AF426171) HydG [Yersinia pestis],(len:463 aa);. Contains CbxX/CfqX superfamily (Interpro|IPR000641, (GO:0005524)). Contains Response regulator receiver (Interpro|IPR001789, (GO:0006355)). Contains Sigma-54 factor interaction domain (Interpro|IPR002078, (GO:0000160), (GO:0003677), (GO:0006355)). Contains Helix-turn-helix, Fis-type (Interpro|IPR002197, (GO:0006355)). Contains AAA ATPase (Interpro|IPR003593, (GO:0000166))

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005810.1 Reference assembly

    Range
    1058204..1059496 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_992358.1 response regulator [Yersinia pestis biovar Microtus str. 91001]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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