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SPAC186.05c GDT1-like protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542574, updated on 20-May-2024

Summary

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Gene symbol
SPAC186.05c
Gene description
GDT1-like protein
Primary source
PomBase:SPAC186.05c
Locus tag
SPAC186.05c
See related
FungiDB:SPAC186.05c; VEuPathDB:SPAC186.05c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See SPAC186.05c in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (5540032..5541502, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene putative L-asparaginase Neighboring gene uncharacterized protein Neighboring gene isomerase Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The yeast Gdt1 protein mediates the exchange of H(+) for Ca(2+) and Mn(2+) influencing the Golgi pH. Deschamps A, et al. J Biol Chem, 2023 May. PMID 36963491, Free PMC Article
  2. Yeast Gdt1 is a Golgi-localized calcium transporter required for stress-induced calcium signaling and protein glycosylation. Colinet AS, et al. Sci Rep, 2016 Apr 14. PMID 27075443, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables calcium ion transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables calcium:proton antiporter activity TAS
Traceable Author Statement
more info
 PubMed 
enables manganese ion transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables manganese:proton antiporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi calcium ion homeostasis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in Golgi calcium ion transmembrane transport TAS
Traceable Author Statement
more info
 PubMed 
involved_in Golgi calcium ion transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in calcium ion transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in manganese ion transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in proton transmembrane transport TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
GDT1-like protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    5540032..5541502 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020453.2 → NP_595023.1  GDT1-like protein [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595023.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9P7Q0
    Conserved Domains (2) summary
    COG2119
    Location:24 → 262
    Gdt1; Putative Ca2+/H+ antiporter, TMEM165/GDT1 family [General function prediction only]
    pfam01169
    Location:185 → 254
    UPF0016; Uncharacterized protein family UPF0016
Nucleotide Protein
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