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SPBC359.04c putative DIPSY family glycoprotein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540935, updated on 13-Mar-2024

Summary

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Gene symbol
SPBC359.04c
Gene description
putative DIPSY family glycoprotein
Primary source
PomBase:SPBC359.04c
Locus tag
SPBC359.04c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003423.3 (117892..121286, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene amino acid permease Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene multi drug resistance-associated protein abc3 Neighboring gene miscRNA Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Posttranscriptional regulation of cell-cell interaction protein-encoding transcripts by Zfs1p in Schizosaccharomyces pombe. Wells ML, et al. Mol Cell Biol, 2012 Oct. PMID 22907753, Free PMC Article
  2. Molecular phylogenetics of ascomycotal adhesins--a novel family of putative cell-surface adhesive proteins in fission yeasts. Linder T, et al. Fungal Genet Biol, 2008 Apr. PMID 17870620
  3. Deciphering the transcriptional-regulatory network of flocculation in Schizosaccharomyces pombe. Kwon EJ, et al. PLoS Genet, 2012. PMID 23236291, Free PMC Article
  4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables cell adhesion mediator activity ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in flocculation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in external side of cell wall TAS
Traceable Author Statement
more info
 PubMed 

General protein information

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Preferred Names
putative DIPSY family glycoprotein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    117892..121286 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001356052.1 → NP_001342964.1  putative DIPSY family glycoprotein [Schizosaccharomyces pombe]

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9P5N1
    Conserved Domains (1) summary
    pfam11763
    Location:232 → 357
    DIPSY; Cell-wall adhesin ligand-binding C-terminal
Nucleotide Protein
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