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MatE family transporter [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539460, updated on 18-Sep-2024

Summary

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Official Full Name
MatE family transporter
Primary source
PomBase:SPCC4B3.13
Locus tag
SPOM_SPCC4B3.13
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_003421.2 (1151957..1153927, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene anillin-related medial ring protein Mid1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein Cwf20 Neighboring gene histone lysine H4-K20 methyltransferase Set9 Neighboring gene ncRNA Neighboring gene protein fra3 Neighboring gene inositol 1,3,4,5,6-pentakisphosphate (IP5) kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High-Throughput Identification of Nuclear Envelope Protein Interactions in Schizosaccharomyces pombe Using an Arrayed Membrane Yeast-Two Hybrid Library. Varberg JM, et al. G3 (Bethesda), 2020 Dec 3. PMID 33109728, Free PMC Article
  2. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
  
enables transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables xenobiotic transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in xenobiotic detoxification by transmembrane export across the plasma membrane IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in fungal-type vacuole membrane HDA PubMed 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
MatE family transporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    1151957..1153927 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023069.3 → NP_588077.1  MatE family transporter [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588077.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9USK3
    Conserved Domains (2) summary
    COG0534
    Location:87 → 535
    NorM; Na+-driven multidrug efflux pump [Defense mechanisms]
    cd13132
    Location:96 → 530
    MATE_eukaryotic; Eukaryotic members of the multidrug and toxic compound extrusion (MATE) family
Nucleotide Protein
Heading Accession and Version

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