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SPCC622.14 putative GTPase-activating protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539181, updated on 11-Apr-2024

Summary

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Gene symbol
SPCC622.14
Gene description
putative GTPase-activating protein
Primary source
PomBase:SPCC622.14
Locus tag
SPCC622.14
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: III
Exon count:
4
Sequence:
Chromosome: III; NC_003421.2 (1426997..1429463)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene Tel Two Interacting protein 1 Neighboring gene miscRNA Neighboring gene uncharacterized protein Neighboring gene miscRNA Neighboring gene Jmjc domain-containing protein Epe1 Neighboring gene miscRNA Neighboring gene siderophore-Fe(3+) transporter Str2 Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of Mug33 reveals complementary roles for actin cable-dependent transport and exocyst regulators in fission yeast exocytosis. Snaith HA, et al. J Cell Sci, 2011 Jul 1. PMID 21652630, Free PMC Article
  2. Proximity-dependent biotinylation mediated by TurboID to identify protein-protein interaction networks in yeast. Larochelle M, et al. J Cell Sci, 2019 May 31. PMID 31064814
  3. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article
  4. A non-transcriptional role for the glucocorticoid receptor in mediating the cell stress response. Ptushkina M, et al. Sci Rep, 2017 Sep 21. PMID 28935859, Free PMC Article
  5. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables GTPase activator activity ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in COPI coating of Golgi vesicle IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of endocytosis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in cytoplasm HDA PubMed 

General protein information

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Preferred Names
putative GTPase-activating protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    1426997..1429463
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023176.3 → NP_588186.2  putative GTPase-activating protein [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588186.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94601
    Conserved Domains (2) summary
    COG5347
    Location:1 → 321
    COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
    pfam01412
    Location:5 → 115
    ArfGap; Putative GTPase activating protein for Arf
Nucleotide Protein
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