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dany distal antenna-young [ Drosophila melanogaster (fruit fly) ]

Gene ID: 246593, updated on 11-Sep-2024

Summary

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Official Symbol
danyprovided by FlyBase
Official Full Name
distal antenna-youngprovided by FlyBase
Primary source
FLYBASE:FBgn0050401
Locus tag
Dmel_CG30401
See related
AllianceGenome:FB:FBgn0050401
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG13496; CG30401; Dmel\CG30401
Summary
Predicted to enable DNA binding activity. Involved in regulation of transcription from RNA polymerase II promoter involved in spermatogenesis. Located in nucleolus and polytene chromosome interband. Is expressed in gonad. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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See dany in Genome Data Viewer
Location:
58B1-58B1; 2-98 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (21985626..21986938, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (17873131..17874443, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Gustatory receptor 58b Neighboring gene Gustatory receptor 58a Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Protein phosphatase D5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An autoregulatory switch in sex-specific phf7 transcription causes loss of sexual identity and tumors in the Drosophila female germline. Smolko AE, et al. Development, 2020 Sep 11. PMID 32816970, Free PMC Article
  2. Drosophila dany is essential for transcriptional control and nuclear architecture in spermatocytes. Trost M, et al. Development, 2016 Jul 15. PMID 27436041
  3. Early development of Drosophila embryos requires Smc5/6 function during oogenesis. Tran M, et al. Biol Open, 2016 Jul 15. PMID 27288507, Free PMC Article
  4. How do Wolbachia modify the Drosophila ovary? New evidences support the "titration-restitution" model for the mechanisms of Wolbachia-induced CI. He Z, et al. BMC Genomics, 2019 Jul 24. PMID 31340757, Free PMC Article
  5. The Drosophila Pipsqueak protein defines a new family of helix-turn-helix DNA-binding proteins. Siegmund T, et al. Dev Genes Evol, 2002 Apr. PMID 11976954

See all (26) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Dany is essential for the coordination of change in cell type-specific expression programs and large-scale spatial chromatin reorganization.
    Title: Drosophila dany is essential for transcriptional control and nuclear architecture in spermatocytes.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in polytene chromosome interband IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
distal antenna-young
Names
CG30401-PA
CG30401-PC
dany-PA
dany-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    21985626..21986938 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_166493.2 → NP_726137.2  distal antenna-young, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_726137.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    E0R921, Q9W2B0
    Conserved Domains (2) summary
    TIGR02937
    Location:17 → 62
    sigma70-ECF; RNA polymerase sigma factor, sigma-70 family
    cl21459
    Location:10 → 60
    HTH; Helix-turn-helix domains

  2. NM_166494.3 → NP_726138.1  distal antenna-young, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_726138.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    E0R921, Q9W2B0
    Related
    FBpp0071647
    Conserved Domains (2) summary
    TIGR02937
    Location:17 → 62
    sigma70-ECF; RNA polymerase sigma factor, sigma-70 family
    cl21459
    Location:10 → 60
    HTH; Helix-turn-helix domains
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9W2B0 Q9W2B0

Gene LinkOut

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