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Bathy01g06140 PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein [ Bathycoccus prasinos ]

Gene ID: 19018349, updated on 16-Nov-2023

Summary

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Gene symbol
Bathy01g06140
Gene description
PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein
Locus tag
Bathy01g06140
Gene type
protein coding
RNA name
PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein
RefSeq status
PROVISIONAL
Organism
Bathycoccus prasinos (strain: RCC 1105)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_024008.1 (1113848..1116860, complement)

Chromosome 1 - NC_024008.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene PREDICTED: similar to predicted protein Neighboring gene S-adenosyl-methyltransferase MraW

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024008.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA damage checkpoint IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_024008.1 Reference assembly

    Range
    1113848..1116860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007515331.1 → XP_007515393.1  PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein [Bathycoccus prasinos]

    See identical proteins and their annotated locations for XP_007515393.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K8E997
    Conserved Domains (6) summary
    COG2319
    Location:638 → 954
    WD40; WD40 repeat [General function prediction only]
    COG5048
    Location:62 → 139
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:83 → 103
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:96 → 120
    zf-H2C2_2; Zinc-finger double domain
    sd00039
    Location:642 → 684
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:641 → 955
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
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