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PHAVU_007G122400g hypothetical protein [ Phaseolus vulgaris ]

Gene ID: 18625659, updated on 28-Dec-2023

Summary

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Gene symbol
PHAVU_007G122400g
Gene description
hypothetical protein
Locus tag
PHAVU_007G122400g
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Phaseolus vulgaris (cultivar: G19833)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Genomic context

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Location:
chromosome: 7
Exon count:
6
Sequence:
Chromosome: 7; NC_023753.1 (22033909..22039246, complement)

Chromosome 7 - NC_023753.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023753.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Prp19 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_007144020.1
  • encoded by transcript PHAVU_007G1224001m

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_023753.1 Reference assembly

    Range
    22033909..22039246 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007143958.1 → XP_007144020.1  hypothetical protein PHAVU_007G122400g [Phaseolus vulgaris]

    See identical proteins and their annotated locations for XP_007144020.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    V7BDU9
    Conserved Domains (4) summary
    smart00717
    Location:7 → 55
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    cd11659
    Location:55 → 106
    SANT_CDC5_II; SANT/myb-like DNA-binding domain of Cell Division Cycle 5-Like Protein repeat II
    pfam11831
    Location:406 → 654
    Myb_Cef; pre-mRNA splicing factor component
    pfam13921
    Location:10 → 70
    Myb_DNA-bind_6; Myb-like DNA-binding domain
Protein Accession Links
GenPept Link UniProtKB Link
ESW16014.1

Gene LinkOut

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Molecular Biology Databases