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LOC18611039 B3 domain-containing transcription factor VRN1 [ Theobroma cacao (cacao) ]

Gene ID: 18611039, updated on 9-Nov-2023

Summary

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Gene symbol
LOC18611039
Gene description
B3 domain-containing transcription factor VRN1
Gene type
protein coding
RefSeq status
MODEL
Organism
Theobroma cacao
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Genomic context

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Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 1 NC_030850.1 (2151847..2154924, complement)

Chromosome 1 - NC_030850.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 CYP82D47-like Neighboring gene putative B3 domain-containing protein At5g66980 Neighboring gene B3 domain-containing transcription factor VRN1 Neighboring gene B3 domain-containing transcription factor VRN1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_030850.1 Chromosome 1 Reference Criollo_cocoa_genome_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
B3 domain-containing transcription factor VRN1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Criollo_cocoa_genome_V2 Primary Assembly

Genomic

  1. NC_030850.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Range
    2151847..2154924 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018116709.1 → XP_017972198.1  B3 domain-containing transcription factor VRN1

    UniProtKB/TrEMBL
    A0A061DG54
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases