U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC18596371 transcription factor JUNGBRUNNEN 1 [ Theobroma cacao (cacao) ]

Gene ID: 18596371, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC18596371
Gene description
transcription factor JUNGBRUNNEN 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Theobroma cacao
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 6 NC_030855.1 (21109973..21112097, complement)

Chromosome 6 - NC_030855.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18596369 Neighboring gene multiple RNA-binding domain-containing protein 1 Neighboring gene haloacid dehalogenase-like hydrolase domain-containing protein At3g48420 Neighboring gene protein ROOT HAIR DEFECTIVE 3 homolog 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_030855.1 Chromosome 6 Reference Criollo_cocoa_genome_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcription factor JUNGBRUNNEN 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Criollo_cocoa_genome_V2 Primary Assembly

Genomic

  1. NC_030855.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Range
    21109973..21112097 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007024798.2 → XP_007024860.2  transcription factor JUNGBRUNNEN 1

    UniProtKB/TrEMBL
    A0A061GE93
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases