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LOC18594176 phosphoenolpyruvate carboxylase [ Theobroma cacao (cacao) ]

Gene ID: 18594176, updated on 9-Nov-2023

Summary

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Gene symbol
LOC18594176
Gene description
phosphoenolpyruvate carboxylase
Gene type
protein coding
RefSeq status
MODEL
Organism
Theobroma cacao
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Genomic context

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Location:
chromosome: 7
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 7 NC_030856.1 (6557645..6563948, complement)

Chromosome 7 - NC_030856.1Genomic Context describing neighboring genes Neighboring gene UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 Neighboring gene dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase Neighboring gene phosphoacetylglucosamine mutase Neighboring gene epidermis-specific secreted glycoprotein EP1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_030856.1 Chromosome 7 Reference Criollo_cocoa_genome_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphoenolpyruvate carboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbon fixation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leaf development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in chloroplast IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoenolpyruvate carboxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Criollo_cocoa_genome_V2 Primary Assembly

Genomic

  1. NC_030856.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Range
    6557645..6563948 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007021667.2 → XP_007021729.2  phosphoenolpyruvate carboxylase

    UniProtKB/TrEMBL
    A0A061F8Q3

  2. XM_007021666.2 → XP_007021728.2  phosphoenolpyruvate carboxylase

    UniProtKB/TrEMBL
    A0A061F8Q3
Nucleotide Protein
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Molecular Biology Databases