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TRIREDRAFT_121405 aminotransferase class-III [ Trichoderma reesei QM6a ]

Gene ID: 18483143, updated on 18-Sep-2024

Summary

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Gene symbol
TRIREDRAFT_121405
Gene description
aminotransferase class-III
Locus tag
TRIREDRAFT_121405
See related
FungiDB:TRIREDRAFT_121405; VEuPathDB:TRIREDRAFT_121405
Gene type
protein coding
RNA name
aminotransferase class-III
RefSeq status
PROVISIONAL
Organism
Trichoderma reesei QM6a (strain: QM6a, type-material: type material of Trichoderma reesei)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Hypocreaceae; Trichoderma
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Genomic context

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Location:
chromosome: Unknown
Exon count:
7

NW_006711154.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene N-terminal binuclear Zn cluster-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006711154.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina). Martinez D, et al. Nat Biotechnol, 2008 May. PMID 18454138

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyric acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aminotransferase class-III
XP_006964702.1
  • pfam00202, Aminotran_3, Aminotransferase class-III

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006711154.1 Reference assembly

    Range
    713513..715568 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006964640.1 → XP_006964702.1  aminotransferase class-III [Trichoderma reesei QM6a]

    See identical proteins and their annotated locations for XP_006964702.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024SFJ8, G0RH60
    Conserved Domains (2) summary
    COG0160
    Location:1 → 460
    GabT; 4-aminobutyrate aminotransferase or related aminotransferase [Amino acid transport and metabolism]
    cl18945
    Location:7 → 457
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
Protein Accession Links
GenPept Link UniProtKB Link
EGR49573.1

Gene LinkOut

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Molecular Biology Databases