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LOC18436056 dof zinc finger protein DOF5.1 [ Amborella trichopoda ]

Gene ID: 18436056, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18436056
Gene description
dof zinc finger protein DOF5.1
Locus tag
AMTR_s00012p00176640
Gene type
protein coding
RefSeq status
MODEL
Organism
Amborella trichopoda
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella
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Genomic context

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See LOC18436056 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current AMTR1.0 (GCF_000471905.2) Unplaced Scaffold NW_006498806.1 (2918359..2920592, complement)

NW_006498806.1Genomic Context describing neighboring genes Neighboring gene palmitoyltransferase ZDHHC17 Neighboring gene 60S ribosomal protein L36-3-like Neighboring gene uncharacterized LOC18436058 Neighboring gene 60S ribosomal protein L36-3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006498806.1 Unplaced Scaffold Reference AMTR1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dof zinc finger protein DOF5.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Amborella trichopoda Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AMTR1.0 Primary Assembly

Genomic

  1. NW_006498806.1 Reference AMTR1.0 Primary Assembly

    Range
    2918359..2920592 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006846083.3 → XP_006846146.1  dof zinc finger protein DOF5.1

    See identical proteins and their annotated locations for XP_006846146.1

    UniProtKB/TrEMBL
    W1PJI4
    Conserved Domains (1) summary
    pfam02701
    Location:58 → 114
    zf-Dof; Dof domain, zinc finger
Nucleotide Protein
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