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LOC18435920 homeobox-leucine zipper protein HOX32 [ Amborella trichopoda ]

Gene ID: 18435920, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18435920
Gene description
homeobox-leucine zipper protein HOX32
Locus tag
AMTR_s00155p00069240
Gene type
protein coding
RefSeq status
MODEL
Organism
Amborella trichopoda
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current AMTR1.0 (GCF_000471905.2) Unplaced Scaffold NW_006498792.1 (727550..737553, complement)

NW_006498792.1Genomic Context describing neighboring genes Neighboring gene putative pentatricopeptide repeat-containing protein At5g52630 Neighboring gene kxDL motif-containing protein 1 Neighboring gene nuclear transcription factor Y subunit A-7 Neighboring gene protein BZR1 homolog 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006498792.1 Unplaced Scaffold Reference AMTR1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox-leucine zipper protein HOX32

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Amborella trichopoda Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AMTR1.0 Primary Assembly

Genomic

  1. NW_006498792.1 Reference AMTR1.0 Primary Assembly

    Range
    727550..737553 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006845952.3 → XP_006846015.1  homeobox-leucine zipper protein HOX32

    See identical proteins and their annotated locations for XP_006846015.1

    UniProtKB/TrEMBL
    W1PKQ6
    Conserved Domains (4) summary
    cd08875
    Location:160 → 376
    START_ArGLABRA2_like; C-terminal lipid-binding START domain of the Arabidopsis homeobox protein GLABRA 2 and related proteins
    cd14686
    Location:69 → 108
    bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
    pfam00046
    Location:17 → 74
    Homeobox; Homeobox domain
    pfam08670
    Location:700 → 838
    MEKHLA; MEKHLA domain
Nucleotide Protein
Heading Accession and Version

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