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LOC18049966 ethylene-responsive transcription factor 1A [ Citrus x clementina ]

Gene ID: 18049966, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18049966
Gene description
ethylene-responsive transcription factor 1A
Locus tag
CICLE_v10021652mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262339.1 (5239874..5241091, complement)

NW_006262339.1Genomic Context describing neighboring genes Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 Neighboring gene COP9 signalosome complex subunit 7 Neighboring gene ethylene-responsive transcription factor 6 Neighboring gene ATPase 11, plasma membrane-type

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006262339 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ethylene-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylene-responsive transcription factor 1A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262339.1 Reference Citrus_clementina_v1.0

    Range
    5239874..5241091 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006440171.2 → XP_006440234.1  ethylene-responsive transcription factor 1A

    See identical proteins and their annotated locations for XP_006440234.1

    UniProtKB/TrEMBL
    V4VL48
    Conserved Domains (1) summary
    smart00380
    Location:138 → 202
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein
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