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LOC18034312 basic leucine zipper 23 [ Citrus x clementina ]

Gene ID: 18034312, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18034312
Gene description
basic leucine zipper 23
Locus tag
CICLE_v10028931mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262022.1 (997973..1001786, complement)

NW_006262022.1Genomic Context describing neighboring genes Neighboring gene heavy metal-associated isoprenylated plant protein 26 Neighboring gene WD-40 repeat-containing protein MSI3 Neighboring gene probable receptor-like protein kinase At5g18500 Neighboring gene ubiquitin-conjugating enzyme E2 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006262022 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
basic leucine zipper 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262022.1 Reference Citrus_clementina_v1.0

    Range
    997973..1001786 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024178757.1 → XP_024034525.1  basic leucine zipper 23

    UniProtKB/TrEMBL
    V4SAH7, V4SFQ8
    Conserved Domains (2) summary
    smart00338
    Location:82 → 148
    BRLZ; basic region leucin zipper
    cd14686
    Location:88 → 142
    bZIP; coiled coil [structural motif]

  2. XM_024178756.1 → XP_024034524.1  basic leucine zipper 23

    UniProtKB/TrEMBL
    V4SAH7, V4SFQ8
    Conserved Domains (2) summary
    smart00338
    Location:82 → 148
    BRLZ; basic region leucin zipper
    cd14686
    Location:88 → 142
    bZIP; coiled coil [structural motif]

  3. XM_006422535.2 → XP_006422598.1  basic leucine zipper 23

    See identical proteins and their annotated locations for XP_006422598.1

    UniProtKB/TrEMBL
    V4SAH7, V4SFQ8
    Conserved Domains (2) summary
    smart00338
    Location:82 → 148
    BRLZ; basic region leucin zipper
    cd14686
    Location:88 → 142
    bZIP; coiled coil [structural motif]
Nucleotide Protein
Heading Accession and Version

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