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LOC18029860 transcription factor MYB3R-1 [ Eutrema salsugineum ]

Gene ID: 18029860, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18029860
Gene description
transcription factor MYB3R-1
Locus tag
EUTSA_v10024320mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256909.1 (3084469..3090124, complement)

NW_006256909.1Genomic Context describing neighboring genes Neighboring gene TOM1-like protein 9 Neighboring gene uncharacterized LOC18029859 Neighboring gene la protein 1 Neighboring gene putative defensin-like protein 231

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006256909 Unplaced Scaffold Reference Eutsalg1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor MYB3R-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256909.1 Reference Eutsalg1_0

    Range
    3084469..3090124 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006412373.2 → XP_006412436.2  transcription factor MYB3R-1

    UniProtKB/TrEMBL
    V4MBV4
    Conserved Domains (2) summary
    pfam13921
    Location:38 → 95
    Myb_DNA-bind_6; Myb-like DNA-binding domain
    cl28544
    Location:84 → 188
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
Nucleotide Protein
Heading Accession and Version

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