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F55G11.7 CUB-like domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 178246, updated on 18-Sep-2024

Summary

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Official Symbol
F55G11.7
Official Full Name
CUB-like domain-containing protein
Primary source
WormBase:WBGene00010127
Locus tag
CELE_F55G11.7
See related
AllianceGenome:WB:WBGene00010127
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Involved in innate immune response. Is expressed in amphid neurons; head neurons; intestine; phasmid neurons; and rectal gland cell. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
chromosome: IV
Exon count:
8
Sequence:
Chromosome: IV; NC_003282.8 (12960436..12962155)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene CUB-like domain-containing protein Neighboring gene CUB-like domain-containing protein Neighboring gene CUB-like domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A conserved role for a GATA transcription factor in regulating epithelial innate immune responses. Shapira M, et al. Proc Natl Acad Sci U S A, 2006 Sep 19. PMID 16968778, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in innate immune response HEP PubMed 
involved_in innate immune response IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
CUB-like domain-containing protein
NP_502480.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    12960436..12962155
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_070079.5 → NP_502480.1  CUB-like domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502480.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XUD5
    Conserved Domains (1) summary
    pfam02408
    Location:17 → 135
    CUB_2; CUB-like domain
Nucleotide Protein
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