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C02D5.2 GILT-like protein C02D5.2 [ Caenorhabditis elegans ]

Gene ID: 176203, updated on 18-Sep-2024

Summary

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Official Symbol
C02D5.2
Official Full Name
GILT-like protein C02D5.2
Primary source
WormBase:WBGene00015336
Locus tag
CELE_C02D5.2
See related
AllianceGenome:WB:WBGene00015336
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable oxidoreductase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human IFI30 (IFI30 lysosomal thiol reductase). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
chromosome: III
Exon count:
6
Sequence:
Chromosome: III; NC_003281.10 (8557335..8559198)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Glutathione S-transferase omega Neighboring gene putative glutathione transferase omega-2 Neighboring gene putative acyl-CoA dehydrogenase 6 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables oxidoreductase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
GILT-like protein C02D5.2
NP_001040839.1
  • Partially confirmed by transcript evidence
NP_001040840.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    8557335..8559198
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001047374.4 → NP_001040839.1  GILT-like protein C02D5.2 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001040839.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P34276, Q2L6Y8
    Conserved Domains (1) summary
    pfam03227
    Location:140 → 246
    GILT; Gamma interferon inducible lysosomal thiol reductase (GILT)

  2. NM_001047375.3 → NP_001040840.1  GILT-like protein C02D5.2 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001040840.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P34276
    Conserved Domains (1) summary
    pfam03227
    Location:80 → 186
    GILT; Gamma interferon inducible lysosomal thiol reductase (GILT)

RNA

  1. NR_131446.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P34276.1

Gene LinkOut

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