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PPX protoporphyrinogen IX oxidase [ Nannochloropsis gaditana CCMP526 ]

Gene ID: 17361526, updated on 17-Feb-2024

Summary

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Gene symbol
PPX
Gene description
protoporphyrinogen IX oxidase
Locus tag
NGA_0387300
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nannochloropsis gaditana CCMP526 (strain: CCMP526)
Lineage
Eukaryota; Sar; Stramenopiles; Ochrophyta; Eustigmatophyceae; Eustigmatales; Monodopsidaceae; Nannochloropsis
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Genomic context

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See PPX in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_005803536.1Genomic Context describing neighboring genes Neighboring gene protoporphyrinogen oxidase Neighboring gene n -adenine-specific dna methyltransferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005803536.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft genome sequence and genetic transformation of the oleaginous alga Nannochloropis gaditana. Radakovits R, et al. Nat Commun, 2012 Feb 21. PMID 22353717, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxygen-dependent protoporphyrinogen oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in porphyrin-containing compound biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protoporphyrinogen IX oxidase
XP_005854747.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005803536.1 Reference assembly

    Range
    22655..25397
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005854685.1 → XP_005854747.1  protoporphyrinogen IX oxidase, partial [Nannochloropsis gaditana CCMP526]

    See identical proteins and their annotated locations for XP_005854747.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K8YVE0, W7TSK2
    Conserved Domains (2) summary
    PLN02576
    Location:125 → 601
    PLN02576; protoporphyrinogen oxidase
    pfam13450
    Location:137 → 200
    NAD_binding_8; NAD(P)-binding Rossmann-like domain
Nucleotide Protein
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