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Mb myoglobin [ Mus musculus (house mouse) ]

Gene ID: 17189, updated on 8-May-2016
Official Symbol
Mbprovided by MGI
Official Full Name
myoglobinprovided by MGI
Primary source
MGI:MGI:96922
See related
Ensembl:ENSMUSG00000018893
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AI325109
Orthologs
Location:
15 D3; 15 36.36 cM
Exon count:
4
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 15 NC_000081.6 (77015487..77050668, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (76845917..76881098, complement)

Chromosome 15 - NC_000081.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 35933 Neighboring gene predicted gene, 32734 Neighboring gene apolipoprotein L 6 Neighboring gene RIKEN cDNA 1700109K24 gene Neighboring gene RNA binding protein, fox-1 homolog (C. elegans) 2 Neighboring gene predicted gene, 41352

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
heme binding IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
oxygen binding ISO
Inferred from Sequence Orthology
more info
 
oxygen transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
brown fat cell differentiation IDA
Inferred from Direct Assay
more info
PubMed 
enucleate erythrocyte differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
heart development IMP
Inferred from Mutant Phenotype
more info
PubMed 
oxygen transport ISO
Inferred from Sequence Orthology
more info
 
response to hormone ISO
Inferred from Sequence Orthology
more info
 
response to hydrogen peroxide ISO
Inferred from Sequence Orthology
more info
 
response to hypoxia IMP
Inferred from Mutant Phenotype
more info
PubMed 
transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
extracellular exosome ISO
Inferred from Sequence Orthology
more info
 

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001164047.1NP_001157519.1  myoglobin

    See identical proteins and their annotated locations for NP_001157519.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2, and 3 all encode the same protein.
    Source sequence(s)
    AC157554, AK137456, BX527493
    Consensus CDS
    CCDS27597.1
    UniProtKB/Swiss-Prot
    P04247
    UniProtKB/TrEMBL
    Q3UVB1
    Related
    ENSMUSP00000125995, ENSMUST00000169226
    Conserved Domains (1) summary
    cl21461
    Location:6154
    Globin_like; Globin-like proteins
  2. NM_001164048.1NP_001157520.1  myoglobin

    See identical proteins and their annotated locations for NP_001157520.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR, compared to variant 1. Variants 1, 2, and 3 all encode the same protein.
    Source sequence(s)
    AA271284, AK137456, BX527493
    Consensus CDS
    CCDS27597.1
    UniProtKB/Swiss-Prot
    P04247
    UniProtKB/TrEMBL
    Q3UVB1
    Related
    ENSMUSP00000019037, ENSMUST00000019037
    Conserved Domains (1) summary
    cl21461
    Location:6154
    Globin_like; Globin-like proteins
  3. NM_013593.3NP_038621.2  myoglobin

    See identical proteins and their annotated locations for NP_038621.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) represents use of an alternate promoter and 5' UTR, compared to variant 1. Variants 1, 2, and 3 all encode the same protein.
    Source sequence(s)
    AC157554, AL603843, BX527493
    Consensus CDS
    CCDS27597.1
    UniProtKB/Swiss-Prot
    P04247
    UniProtKB/TrEMBL
    Q3UVB1
    Related
    ENSMUSP00000128399, ENSMUST00000166179
    Conserved Domains (1) summary
    cl21461
    Location:6154
    Globin_like; Globin-like proteins

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000081.6 Reference GRCm38.p3 C57BL/6J

    Range
    77015487..77050668 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000037.1 Alternate Mm_Celera

    Range
    78503595..78538817 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)