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R119.5 Protein-L-isoaspartate O-methyltransferase domain-containing protein 1 [ Caenorhabditis elegans ]

Gene ID: 171631, updated on 23-Nov-2023

Summary

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Gene symbol
R119.5
Gene description
Protein-L-isoaspartate O-methyltransferase domain-containing protein 1
Primary source
WormBase:WBGene00020090
Locus tag
CELE_R119.5
See related
AllianceGenome:WB:WBGene00020090
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable protein-L-isoaspartate (D-aspartate) O-methyltransferase activity. Predicted to be involved in protein methylation. Predicted to be active in cytoplasm. Orthologous to human PCMTD1 (protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1) and PCMTD2 (protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See R119.5 in Genome Data Viewer
Location:
chromosome: I
Exon count:
10
Sequence:
Chromosome: I; NC_003279.8 (388470..394415, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene RRM domain-containing protein Neighboring gene Aminopeptidase P N-terminal domain-containing protein Neighboring gene DeHydrogenases, Short chain Neighboring gene Protein lingerer Neighboring gene Transcription initiation factor TFIID subunit 4 Neighboring gene ubiquitinyl hydrolase 1 Neighboring gene WD_REPEATS_REGION domain-containing protein Neighboring gene BTB domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables protein-L-isoaspartate (D-aspartate) O-methyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein-L-isoaspartate (D-aspartate) O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in protein modification process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Protein-L-isoaspartate O-methyltransferase domain-containing protein 1
NP_001248847.1
  • Confirmed by transcript evidence
NP_001248848.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    388470..394415 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001261919.2 → NP_001248848.1  Protein-L-isoaspartate O-methyltransferase domain-containing protein 1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001248848.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O61706
    Conserved Domains (2) summary
    TIGR00080
    Location:4 → 228
    pimt; protein-L-isoaspartate(D-aspartate) O-methyltransferase
    cl17173
    Location:11 → 212
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. NM_001261918.4 → NP_001248847.1  Protein-L-isoaspartate O-methyltransferase domain-containing protein 1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001248847.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H1ZUX5
    Conserved Domains (2) summary
    TIGR00080
    Location:4 → 228
    pimt; protein-L-isoaspartate(D-aspartate) O-methyltransferase
    cl17173
    Location:11 → 212
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
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