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COCSUDRAFT_47211 hypothetical protein [ Coccomyxa subellipsoidea C-169 ]

Gene ID: 17042262, updated on 28-Dec-2023

Summary

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Gene symbol
COCSUDRAFT_47211
Gene description
hypothetical protein
Locus tag
COCSUDRAFT_47211
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Coccomyxa subellipsoidea C-169 (strain: C-169)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa
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Genomic context

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Exon count:
4

NW_005178037.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene Nucleotidyltransferase Neighboring gene exoribonuclease PH component of the exosome Neighboring gene protein-L-isoaspartate O-methyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005178037.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation. Blanc G, et al. Genome Biol, 2012 May 25. PMID 22630137, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005178037.1 Reference assembly

    Range
    2073957..2076653
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005648751.1 → XP_005648808.1  hypothetical protein COCSUDRAFT_47211 [Coccomyxa subellipsoidea C-169]

    See identical proteins and their annotated locations for XP_005648808.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    I0Z0U5
    Conserved Domains (2) summary
    smart00717
    Location:35 → 84
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    cl21498
    Location:33 → 85
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
Nucleotide Protein
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