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pdxH pyridoxamine 5'-phosphate oxidase [ Bordetella parapertussis 12822 ]

Gene ID: 1664956, discontinued on 6-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:

Summary

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Gene symbol
pdxH
Gene description
pyridoxamine 5'-phosphate oxidase
Locus tag
BPP3607
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bordetella parapertussis 12822 (strain: 12822)
Lineage
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002928.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: 3900243-3900866 This hit extended beyond the end of the feature by 1 aa and was clipped.
    HMMPfam hit to PF01243, Pyridoxamine 5'-phosphate oxidase, score 2.8e-100
  • Loc: 3900774-3900815 PS01064 Pyridoxamine 5'-phosphate oxidase signature.

General protein information

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Names
pyridoxamine 5'-phosphate oxidase
NP_885766.1
  • ortholog of Bordetella pertussis (BX470248) BP3251

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002928.3 Reference assembly

    Range
    3900240..3900872
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_885766.1 pyridoxamine 5'-phosphate oxidase [Bordetella parapertussis 12822]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7W4Q1.1

Gene LinkOut

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