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MJ_RS04735 DNA polymerase domain-containing protein [ Methanocaldococcus jannaschii DSM 2661 ]

Gene ID: 1451774, updated on 29-Sep-2023

Summary

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Gene symbol
MJ_RS04735
Gene description
DNA polymerase domain-containing protein
Locus tag
MJ_RS04735
Gene type
protein coding
Organism
Methanocaldococcus jannaschii DSM 2661 (strain: DSM 2661, type-material: type strain of Methanocaldococcus jannaschii)
Lineage
Archaea; Euryarchaeota; Methanomada group; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus
Old locus tag
MJ0885; MJ_0885
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Genomic context

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Sequence:
NC_000909.1 (811397..816289, complement)

NC_000909.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene replication factor C large subunit Neighboring gene molybdopterin biosynthesis protein Neighboring gene 2-phospho-L-lactate guanylyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000909.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Crystallization and preliminary diffraction analysis of a hyperthermostable DNA polymerase from a Thermococcus archaeon. Zhou M, et al. Acta Crystallogr D Biol Crystallogr, 1998 Sep 1. PMID 9757117
  2. Crystal structures of an NH2-terminal fragment of T4 DNA polymerase and its complexes with single-stranded DNA and with divalent metal ions. Wang J, et al. Biochemistry, 1996 Jun 25. PMID 8679562
  3. Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii. Bult CJ, et al. Science, 1996 Aug 23. PMID 8688087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
DNA polymerase domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000909.1 Reference assembly

    Range
    811397..816289 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_064496646.1 DNA polymerase domain-containing protein [Methanocaldococcus jannaschii]

    UniProtKB/TrEMBL
    A0A832SJH8
    Conserved Domains (4) summary
    cd05780
    Location:150 → 340
    DNA_polB_Kod1_like_exo; DEDDy 3'-5' exonuclease domain of Pyrococcus kodakaraensis Kod1 and similar archaeal family-B DNA polymerases
    COG0417
    Location:4 → 421
    PolB; DNA polymerase elongation subunit (family B) [Replication, recombination and repair]
    COG1372
    Location:880 → 1354
    Hop; Intein/homing endonuclease [Replication, recombination and repair, Mobilome: prophages, transposons]
    cl10023
    Location:1354 → 1617
    POLBc; DNA polymerase type-B family catalytic domain. DNA-directed DNA polymerases elongate DNA by adding nucleotide triphosphate (dNTP) residues to the 5'-end of the growing chain of DNA. DNA-directed DNA polymerases are multifunctional with both synthetic ...

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