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DESFE_RS02520 thiamine pyrophosphate-dependent enzyme [ Desulfurococcus amylolyticus DSM 16532 ]

Gene ID: 13062192, updated on 10-Mar-2023

Summary

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Gene symbol
DESFE_RS02520
Gene description
thiamine pyrophosphate-dependent enzyme
Locus tag
DESFE_RS02520
Gene type
protein coding
Organism
Desulfurococcus amylolyticus DSM 16532 (strain: DSM 16532, culture-collection: DSM:16532, type-material: type strain of Desulfurococcus fermentans)
Lineage
Archaea; Thermoproteota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Desulfurococcus
Old locus tag
Desfe_0502
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Genomic context

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Sequence:
NC_018001.1 (475128..476186, complement)

NC_018001.1Genomic Context describing neighboring genes Neighboring gene 2-oxoacid:acceptor oxidoreductase family protein Neighboring gene thiamine pyrophosphate-dependent enzyme Neighboring gene 2-oxoacid:acceptor oxidoreductase subunit alpha Neighboring gene 4Fe-4S dicluster domain-containing protein Neighboring gene hydrogenase maturation protease Neighboring gene 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha Neighboring gene 4Fe-4S binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_018001.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete genome sequence of Desulfurococcus fermentans, a hyperthermophilic cellulolytic crenarchaeon isolated from a freshwater hot spring in Kamchatka, Russia. Susanti D, et al. J Bacteriol, 2012 Oct. PMID 23012283, Free PMC Article
  2. Crystal structure of the thiamin diphosphate-dependent enzyme pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at 2.3 A resolution. Arjunan P, et al. J Mol Biol, 1996 Mar 1. PMID 8604141

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
thiamine pyrophosphate-dependent enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018001.1 Reference assembly

    Range
    475128..476186 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_014767307.1 thiamine pyrophosphate-dependent enzyme [Desulfurococcus amylolyticus]

    See identical proteins and their annotated locations for WP_014767307.1

    UniProtKB/TrEMBL
    I3XR32
    Conserved Domains (2) summary
    PRK11865
    Location:44 → 343
    PRK11865; pyruvate ferredoxin oxidoreductase subunit beta; Provisional
    cd03376
    Location:48 → 283
    TPP_PFOR_porB_like; Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea ...
Nucleotide Protein
Heading Accession and Version

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