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miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB [ Vibrio parahaemolyticus RIMD 2210633 ]

Gene ID: 1188208, updated on 6-Oct-2023

Summary

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Gene symbol
miaB
Gene description
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Locus tag
VP_RS03520
Gene type
protein coding
Organism
Vibrio parahaemolyticus RIMD 2210633 (strain: RIMD 2210633, substrain: RIMD 2210633)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
Old locus tag
VP0733
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Genomic context

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Location:
chromosome: 1
Sequence:
Chromosome: 1; NC_004603.1 (768970..770394, complement)

Chromosome 1 - NC_004603.1Genomic Context describing neighboring genes Neighboring gene rRNA maturation RNase YbeY Neighboring gene PhoH family protein Neighboring gene 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase Neighboring gene tRNA-Leu

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004603.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. MiaB protein from Thermotoga maritima. Characterization of an extremely thermophilic tRNA-methylthiotransferase. Pierrel F, et al. J Biol Chem, 2003 Aug 8. PMID 12766153
  2. Enzymatic modification of tRNAs: MiaB is an iron-sulfur protein. Pierrel F, et al. J Biol Chem, 2002 Apr 19. PMID 11882645
  3. Identification of the miaB gene, involved in methylthiolation of isopentenylated A37 derivatives in the tRNA of Salmonella typhimurium and Escherichia coli. Esberg B, et al. J Bacteriol, 1999 Dec. PMID 10572129, Free PMC Article
  4. TRAM, a predicted RNA-binding domain, common to tRNA uracil methylation and adenine thiolation enzymes. Anantharaman V, et al. FEMS Microbiol Lett, 2001 Apr 13. PMID 11313137
  5. A filamentous phage associated with recent pandemic Vibrio parahaemolyticus O3:K6 strains. Nasu H, et al. J Clin Microbiol, 2000 Jun. PMID 10834969, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
WP_005483497.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004603.1 Reference assembly

    Range
    768970..770394 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_005483497.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB [Vibrio parahaemolyticus]

    See identical proteins and their annotated locations for WP_005483497.1

    UniProtKB/Swiss-Prot
    Q87RP4
    Conserved Domains (1) summary
    PRK14325
    Location:1 → 445
    PRK14325; (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q87RP4.1

Gene LinkOut

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