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STMMW_14241 putative type III secretion protein [ Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 ]

Gene ID: 11759812, discontinued on 20-Aug-2013
  • This record was discontinued.

Summary

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Gene symbol
STMMW_14241
Gene description
putative type III secretion protein
Locus tag
STMMW_14241
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 (strain: D23580, serovar: Typhimurium, sub-species: enterica)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016854.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: 1495283-1495348, 1495409-1495477, 1495715-1495783, 1495820-1495888 4 probable transmembrane helices predicted for STM_MW14241 by TMHMM2.0 at aa 10-31, 52-74, 154-176 and 189-211 inference = protein motif:TMHMM 2.0
  • Loc: 1495296-1495889 inference = protein motif:Pfam:PF00813

General protein information

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Names
putative type III secretion protein
YP_005232478.1
  • pfam_scan;Pfam:PF00813; E()=4.8E-68;score=228.2;query 14-211;description=FliP;
    tmhmm; query 1-216

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016854.1 Reference assembly

    Range
    1495256..1495903
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_005232478.1 putative type III secretion protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version