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TPHA0D04160 hypothetical protein [ Tetrapisispora phaffii CBS 4417 ]

Gene ID: 11531007, updated on 22-Oct-2023

Summary

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Gene symbol
TPHA0D04160
Gene description
hypothetical protein
Locus tag
TPHA_0D04160
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Tetrapisispora phaffii CBS 4417 (strain: type strain:CBS 4417)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Tetrapisispora
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Genomic context

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See TPHA0D04160 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_016523.1 (890978..893731)

Chromosome 4 - NC_016523.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene tRNA-Asn

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016523.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA-templated DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear replication fork IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_003685483.1
  • similar to Saccharomyces cerevisiae CTF4 (YPR135W); ancestral locus Anc_3.473

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016523.1 Reference assembly

    Range
    890978..893731
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003685435.1 → XP_003685483.1  hypothetical protein TPHA_0D04160 [Tetrapisispora phaffii CBS 4417]

    See identical proteins and their annotated locations for XP_003685483.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G8BT78
    Conserved Domains (4) summary
    COG2319
    Location:39 → 371
    WD40; WD40 repeat [General function prediction only]
    pfam12341
    Location:459 → 766
    Mcl1_mid; Minichromosome loss protein, Mcl1, middle region
    sd00039
    Location:100 → 138
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:63 → 343
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
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