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TDEL0A06390 hypothetical protein [ Torulaspora delbrueckii ]

Gene ID: 11502627, updated on 21-Dec-2023

Summary

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Gene symbol
TDEL0A06390
Gene description
hypothetical protein
Locus tag
TDEL_0A06390
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Torulaspora delbrueckii (strain: type strain:CBS 1146)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Torulaspora
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Genomic context

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See TDEL0A06390 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_016501.1 (1117890..1122350)

Chromosome 1 - NC_016501.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016501.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed DNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in error-prone translesion synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of zeta DNA polymerase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_003679182.1
  • similar to Saccharomyces cerevisiae REV3 (YPL167C); ancestral locus Anc_8.694

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016501.1 Reference assembly

    Range
    1117890..1122350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003679134.1 → XP_003679182.1  hypothetical protein TDEL_0A06390 [Torulaspora delbrueckii]

    See identical proteins and their annotated locations for XP_003679182.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G8ZMX7
    Conserved Domains (5) summary
    cd05778
    Location:648 → 876
    DNA_polB_zeta_exo; inactive DEDDy 3'-5' exonuclease domain of eukaryotic DNA polymerase zeta, a family-B DNA polymerase
    cd05534
    Location:903 → 1350
    POLBc_zeta; DNA polymerase type-B zeta subfamily catalytic domain. DNA polymerase (Pol) zeta is a member of the eukaryotic B-family of DNA polymerases and distantly related to DNA Pol delta. Pol zeta plays a major role in translesion replication and the production ...
    COG0417
    Location:590 → 1356
    PolB; DNA polymerase elongation subunit (family B) [Replication, recombination and repair]
    pfam14260
    Location:1381 → 1461
    zf-C4pol; C4-type zinc-finger of DNA polymerase delta
    cl15692
    Location:6 → 77
    CE4_SF; Catalytic NodB homology domain of the carbohydrate esterase 4 superfamily
Nucleotide Protein
Heading Accession and Version

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