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Ecym_4422 hypothetical protein [ Eremothecium cymbalariae DBVPG#7215 ]

Gene ID: 11471588, updated on 22-Oct-2023

Summary

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Gene symbol
Ecym_4422
Gene description
hypothetical protein
Locus tag
Ecym_4422
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Eremothecium cymbalariae DBVPG#7215 (strain: DBVPG#7215)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium
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Genomic context

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See Ecym_4422 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_016452.1 (875376..877148)

Chromosome 4 - NC_016452.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016452.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome evolution in the eremothecium clade of the Saccharomyces complex revealed by comparative genomics. Wendland J, et al. G3 (Bethesda), 2011 Dec. PMID 22384365, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PeBoW complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_003646288.1
  • similar to Ashbya gossypii AAR094W

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016452.1 Reference assembly

    Range
    875376..877148
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003646240.1 → XP_003646288.1  hypothetical protein Ecym_4422 [Eremothecium cymbalariae DBVPG#7215]

    See identical proteins and their annotated locations for XP_003646288.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G8JTW8
    Conserved Domains (3) summary
    COG5163
    Location:1 → 571
    NOP7; Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis]
    pfam06732
    Location:7 → 267
    Pescadillo_N; Pescadillo N-terminus
    pfam16589
    Location:346 → 437
    BRCT_2; BRCT domain, a BRCA1 C-terminus domain
Nucleotide Protein
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