U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Ecym_3540 Hypothetical protein [ Eremothecium cymbalariae DBVPG#7215 ]

Gene ID: 11471098, updated on 22-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
Ecym_3540
Gene description
Hypothetical protein
Locus tag
Ecym_3540
Gene type
protein coding
RNA name
Hypothetical protein
RefSeq status
PROVISIONAL
Organism
Eremothecium cymbalariae DBVPG#7215 (strain: DBVPG#7215)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Ecym_3540 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_016451.1 (1025483..1026361)

Chromosome 3 - NC_016451.1Genomic Context describing neighboring genes Neighboring gene Hypothetical protein Neighboring gene tRNA-Gly Neighboring gene Neighboring gene Hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_016451.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome evolution in the eremothecium clade of the Saccharomyces complex revealed by comparative genomics. Wendland J, et al. G3 (Bethesda), 2011 Dec. PMID 22384365, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
Hypothetical protein
XP_003645833.1
  • similar to Ashbya gossypii AEL078C

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016451.1 Reference assembly

    Range
    1025483..1026361
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003645785.1 → XP_003645833.1  Hypothetical protein Ecym_3540 [Eremothecium cymbalariae DBVPG#7215]

    See identical proteins and their annotated locations for XP_003645833.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G8JQN2
    Conserved Domains (1) summary
    TIGR01071
    Location:28 → 179
    rplO_bact; ribosomal protein L15, bacterial/organelle
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases