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Ecym_1094 hypothetical protein [ Eremothecium cymbalariae DBVPG#7215 ]

Gene ID: 11469566, updated on 25-Jan-2024

Summary

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Gene symbol
Ecym_1094
Gene description
hypothetical protein
Locus tag
Ecym_1094
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Eremothecium cymbalariae DBVPG#7215 (strain: DBVPG#7215)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium
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Genomic context

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See Ecym_1094 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_016449.1 (197536..198585)

Chromosome 1 - NC_016449.1Genomic Context describing neighboring genes Neighboring gene Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016449.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome evolution in the eremothecium clade of the Saccharomyces complex revealed by comparative genomics. Wendland J, et al. G3 (Bethesda), 2011 Dec. PMID 22384365, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of VCP-NPL4-UFD1 AAA ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_003644167.1
  • similar to Ashbya gossypii AFR662C

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016449.1 Reference assembly

    Range
    197536..198585
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003644119.1 → XP_003644167.1  hypothetical protein Ecym_1094 [Eremothecium cymbalariae DBVPG#7215]

    See identical proteins and their annotated locations for XP_003644167.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G8JME1
    Conserved Domains (2) summary
    COG5140
    Location:1 → 349
    UFD1; Ubiquitin fusion-degradation protein [Posttranslational modification, protein turnover, chaperones]
    pfam03152
    Location:19 → 196
    UFD1; Ubiquitin fusion degradation protein UFD1
Nucleotide Protein
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