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egln3 egl-9 family hypoxia-inducible factor 3 [ Parambassis ranga (Indian glassy fish) ]

Gene ID: 114427471, updated on 15-Mar-2024

Summary

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Gene symbol
egln3
Gene description
egl-9 family hypoxia-inducible factor 3
See related
Ensembl:ENSPRNG00000003643
Gene type
protein coding
RefSeq status
MODEL
Organism
Parambassis ranga
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Ambassidae; Parambassis
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 22
Exon count:
5
Annotation release Status Assembly Chr Location
100 current fParRan2.1 (GCF_900634625.1) 22 NC_041042.1 (948014..957674, complement)

Chromosome 22 - NC_041042.1Genomic Context describing neighboring genes Neighboring gene A-kinase anchor protein 6-like Neighboring gene neuronal PAS domain protein 3 Neighboring gene uncharacterized LOC114427481 Neighboring gene serine palmitoyltransferase, small subunit A Neighboring gene e2f-associated phosphoprotein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041042.1 Chromosome 22 Reference fParRan2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferrous iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peptidyl-proline 4-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to hypoxia IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
egl nine homolog 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parambassis ranga Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fParRan2.1

Genomic

  1. NC_041042.1 Reference fParRan2.1

    Range
    948014..957674 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028395565.1 → XP_028251366.1  egl nine homolog 3 isoform X2

    UniProtKB/TrEMBL
    A0A6P7HHN2
    Conserved Domains (1) summary
    smart00702
    Location:50 → 213
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  2. XM_028395564.1 → XP_028251365.1  egl nine homolog 3 isoform X1

    UniProtKB/TrEMBL
    A0A6P7H827
    Related
    ENSPRNP00000006082.1, ENSPRNT00000006670.1
    Conserved Domains (1) summary
    smart00702
    Location:50 → 213
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
Nucleotide Protein
Heading Accession and Version

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