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LOC11419120 scarecrow-like protein 33 [ Medicago truncatula (barrel medic) ]

Gene ID: 11419120, updated on 7-Dec-2023

Summary

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Gene symbol
LOC11419120
Gene description
scarecrow-like protein 33
Locus tag
MtrunA17_Chr2g0328341
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 2 NC_053043.1 (47663108..47665326)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 2 NC_016408.2 (41556079..41558297)

Chromosome 2 - NC_053043.1Genomic Context describing neighboring genes Neighboring gene respirasome Complex Assembly Factor 1 Neighboring gene telomere repeat-binding protein 5 Neighboring gene scarecrow-like protein 33 Neighboring gene scarecrow-like protein 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
scarecrow-like protein 33
Names
GRAS family transcription factor
putative transcription factor GRAS family

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053043.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    47663108..47665326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003597317.4 → XP_003597365.1  scarecrow-like protein 33

    See identical proteins and their annotated locations for XP_003597365.1

    UniProtKB/TrEMBL
    G7IHQ3
    Conserved Domains (1) summary
    pfam03514
    Location:269 → 637
    GRAS; GRAS domain family
Nucleotide Protein
Heading Accession and Version

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