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ECM2 extracellular matrix protein 2 [ Pipra filicauda (Wire-tailed manakin) ]

Gene ID: 113995282, updated on 3-Aug-2024

Summary

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Gene symbol
ECM2
Gene description
extracellular matrix protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Pipra filicauda
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Pipra
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM394559v2 (GCF_003945595.2) Unplaced Scaffold NW_024103463.1 (1146178..1164484)
100 previous assembly ASM394559v1 (GCF_003945595.1) Unplaced Scaffold NW_020893960.1 (1148389..1166948)

NW_024103463.1Genomic Context describing neighboring genes Neighboring gene glycine-rich protein 1-like Neighboring gene ATR interacting protein Neighboring gene inositol-pentakisphosphate 2-kinase Neighboring gene centromere protein P Neighboring gene asporin Neighboring gene osteomodulin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables collagen V binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heparin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell-substrate adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
extracellular matrix protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pipra filicauda Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM394559v2

Genomic

  1. NW_024103463.1 Reference ASM394559v2

    Range
    1146178..1164484
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027735219.2 → XP_027591020.1  extracellular matrix protein 2

    UniProtKB/TrEMBL
    A0A6J2HTH0
Nucleotide Protein
Heading Accession and Version

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