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ITGA6 integrin subunit alpha 6 [ Corapipo altera (White-ruffed manakin) ]

Gene ID: 113944088, updated on 3-Aug-2024

Summary

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Gene symbol
ITGA6
Gene description
integrin subunit alpha 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Corapipo altera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Corapipo
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
30
Annotation release Status Assembly Chr Location
100 current ASM394572v1 (GCF_003945725.1) Unplaced Scaffold NW_020884877.1 (13835119..13971283, complement)

NW_020884877.1Genomic Context describing neighboring genes Neighboring gene neurabin-1-like Neighboring gene uncharacterized LOC113943966 Neighboring gene pyruvate dehydrogenase kinase 1 Neighboring gene distal-less homeobox 2 Neighboring gene distal-less homeobox 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020884877 Unplaced Scaffold Reference ASM394572v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leukocyte migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin alpha-6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corapipo altera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM394572v1

Genomic

  1. NW_020884877.1 Reference ASM394572v1

    Range
    13835119..13971283 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027636719.1 → XP_027492520.1  integrin alpha-6 isoform X3

  2. XM_027636716.1 → XP_027492517.1  integrin alpha-6 isoform X1

  3. XM_027636717.1 → XP_027492518.1  integrin alpha-6 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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