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CDHR1 cadherin related family member 1 [ Bos indicus x Bos taurus (hybrid cattle) ]

Gene ID: 113885488, updated on 15-Mar-2024

Summary

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Gene symbol
CDHR1
Gene description
cadherin related family member 1
See related
Ensembl:ENSBIXG00005030897
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus x Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 28
Exon count:
17
Annotation release Status Assembly Chr Location
100 current UOA_Brahman_1 (GCF_003369695.1) 28 NC_040103.1 (39172038..39194920)

Chromosome 28 - NC_040103.1Genomic Context describing neighboring genes Neighboring gene growth hormone inducible transmembrane protein Neighboring gene G protein-coupled receptor 15 ligand Neighboring gene leucine rich repeat, Ig-like and transmembrane domains 2 Neighboring gene leucine rich repeat, Ig-like and transmembrane domains 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040103.1 Chromosome 28 Reference UOA_Brahman_1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adherens junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catenin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cadherin-related family member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus x Bos taurus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UOA_Brahman_1

Genomic

  1. NC_040103.1 Reference UOA_Brahman_1

    Range
    39172038..39194920
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027530870.1 → XP_027386671.1  cadherin-related family member 1

    UniProtKB/TrEMBL
    A0A4W2D3V0, A0A4W2F5J1
    Related
    ENSBIXP00005000002.1, ENSBIXT00005055449.1
Nucleotide Protein
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